Kyselková, Martina

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Two novel species isolated from wheat rhizospheres in Serbia: Pseudomonas serbica sp. nov. and Pseudomonas serboccidentalis sp. nov.

Todorović, Irena; Abrouk, Danis; Kyselková, Martina; Lavire, Céline; Rey, Marjolaine; Raičević, Vera; Jovičić-Petrović, Jelena; Moënne-Loccoz, Yvan; Muller, Daniel

(2023)

TY  - JOUR
AU  - Todorović, Irena
AU  - Abrouk, Danis
AU  - Kyselková, Martina
AU  - Lavire, Céline
AU  - Rey, Marjolaine
AU  - Raičević, Vera
AU  - Jovičić-Petrović, Jelena
AU  - Moënne-Loccoz, Yvan
AU  - Muller, Daniel
PY  - 2023
UR  - http://aspace.agrif.bg.ac.rs/handle/123456789/6337
AB  - Pseudomonas strains IT-194P, IT-215P, IT-P366T and IT-P374T were isolated from the rhizospheres of wheat grown in soils sampled from different fields (some of them known to be disease-suppressive) located near Mionica, Serbia. Phylogenetic analysis of the 16S rRNA genes and of whole genome sequences showed that these strains belong to two potentially new species, one containing strains IT-P366T and IT-194P and clustering (whole genome analysis) next to P. umsongensis DSM16611T, and another species containing strains IT-P374T and IT-215P and clustering next to P. koreensis LMG21318T. Genome analysis confirmed the proposition of novel species, as ANI was below the threshold of 95% and dDDH below 70% for strains IT-P366T (compared with P. umsongensis DSM16611T) and IT-P374T (compared with P. koreensis LMG21318T). Unlike P. umsongensis DSM16611T, strains of P. serbica can grow on D-mannitol, but not on pectin, D-galacturonic acid, L-galactonic acid lactone and α-hydroxybutyric acid. In contrary to P. koreensis LMG21318T, strains of P. serboccidentalis can use sucrose, inosine and α-ketoglutaric acid (but not L-histidine) as carbon sources. Altogether, these results indicate the existence of two novel species for which we propose the names Pseudomonas serbica sp. nov., with the type strain IT-P366T (=CFBP 9060 T = LMG 32732 T = EML 1791 T) and Pseudomonas serboccidentalis sp. nov., with the type strain IT-P374T (=CFBP 9061 T = LMG 32734 T = EML 1792 T). Strains from this study presented a set of phytobeneficial functions modulating plant hormonal balance, plant nutrition and plant protection, suggesting a potential as Plant Growth-Promoting Rhizobacteria (PGPR). © 2023 Elsevier GmbH
T2  - Systematic and Applied Microbiology
T2  - Systematic and Applied Microbiology
T1  - Two novel species isolated from wheat rhizospheres in Serbia: Pseudomonas
serbica sp. nov. and Pseudomonas serboccidentalis sp. nov.
IS  - 4
VL  - 46
DO  - 10.1016/j.syapm.2023.126425
ER  - 
@article{
author = "Todorović, Irena and Abrouk, Danis and Kyselková, Martina and Lavire, Céline and Rey, Marjolaine and Raičević, Vera and Jovičić-Petrović, Jelena and Moënne-Loccoz, Yvan and Muller, Daniel",
year = "2023",
abstract = "Pseudomonas strains IT-194P, IT-215P, IT-P366T and IT-P374T were isolated from the rhizospheres of wheat grown in soils sampled from different fields (some of them known to be disease-suppressive) located near Mionica, Serbia. Phylogenetic analysis of the 16S rRNA genes and of whole genome sequences showed that these strains belong to two potentially new species, one containing strains IT-P366T and IT-194P and clustering (whole genome analysis) next to P. umsongensis DSM16611T, and another species containing strains IT-P374T and IT-215P and clustering next to P. koreensis LMG21318T. Genome analysis confirmed the proposition of novel species, as ANI was below the threshold of 95% and dDDH below 70% for strains IT-P366T (compared with P. umsongensis DSM16611T) and IT-P374T (compared with P. koreensis LMG21318T). Unlike P. umsongensis DSM16611T, strains of P. serbica can grow on D-mannitol, but not on pectin, D-galacturonic acid, L-galactonic acid lactone and α-hydroxybutyric acid. In contrary to P. koreensis LMG21318T, strains of P. serboccidentalis can use sucrose, inosine and α-ketoglutaric acid (but not L-histidine) as carbon sources. Altogether, these results indicate the existence of two novel species for which we propose the names Pseudomonas serbica sp. nov., with the type strain IT-P366T (=CFBP 9060 T = LMG 32732 T = EML 1791 T) and Pseudomonas serboccidentalis sp. nov., with the type strain IT-P374T (=CFBP 9061 T = LMG 32734 T = EML 1792 T). Strains from this study presented a set of phytobeneficial functions modulating plant hormonal balance, plant nutrition and plant protection, suggesting a potential as Plant Growth-Promoting Rhizobacteria (PGPR). © 2023 Elsevier GmbH",
journal = "Systematic and Applied Microbiology, Systematic and Applied Microbiology",
title = "Two novel species isolated from wheat rhizospheres in Serbia: Pseudomonas
serbica sp. nov. and Pseudomonas serboccidentalis sp. nov.",
number = "4",
volume = "46",
doi = "10.1016/j.syapm.2023.126425"
}
Todorović, I., Abrouk, D., Kyselková, M., Lavire, C., Rey, M., Raičević, V., Jovičić-Petrović, J., Moënne-Loccoz, Y.,& Muller, D.. (2023). Two novel species isolated from wheat rhizospheres in Serbia: Pseudomonas
serbica sp. nov. and Pseudomonas serboccidentalis sp. nov.. in Systematic and Applied Microbiology, 46(4).
https://doi.org/10.1016/j.syapm.2023.126425
Todorović I, Abrouk D, Kyselková M, Lavire C, Rey M, Raičević V, Jovičić-Petrović J, Moënne-Loccoz Y, Muller D. Two novel species isolated from wheat rhizospheres in Serbia: Pseudomonas
serbica sp. nov. and Pseudomonas serboccidentalis sp. nov.. in Systematic and Applied Microbiology. 2023;46(4).
doi:10.1016/j.syapm.2023.126425 .
Todorović, Irena, Abrouk, Danis, Kyselková, Martina, Lavire, Céline, Rey, Marjolaine, Raičević, Vera, Jovičić-Petrović, Jelena, Moënne-Loccoz, Yvan, Muller, Daniel, "Two novel species isolated from wheat rhizospheres in Serbia: Pseudomonas
serbica sp. nov. and Pseudomonas serboccidentalis sp. nov." in Systematic and Applied Microbiology, 46, no. 4 (2023),
https://doi.org/10.1016/j.syapm.2023.126425 . .
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