TY  - JOUR
AU  - Todorović, Irena
AU  - Abrouk, Danis
AU  - Kyselková, Martina
AU  - Lavire, Céline
AU  - Rey, Marjolaine
AU  - Raičević, Vera
AU  - Jovičić-Petrović, Jelena
AU  - Moënne-Loccoz, Yvan
AU  - Muller, Daniel
PY  - 2023
UR  - http://aspace.agrif.bg.ac.rs/handle/123456789/6337
AB  - Pseudomonas strains IT-194P, IT-215P, IT-P366T and IT-P374T were isolated from the rhizospheres of wheat grown in soils sampled from different fields (some of them known to be disease-suppressive) located near Mionica, Serbia. Phylogenetic analysis of the 16S rRNA genes and of whole genome sequences showed that these strains belong to two potentially new species, one containing strains IT-P366T and IT-194P and clustering (whole genome analysis) next to P. umsongensis DSM16611T, and another species containing strains IT-P374T and IT-215P and clustering next to P. koreensis LMG21318T. Genome analysis confirmed the proposition of novel species, as ANI was below the threshold of 95% and dDDH below 70% for strains IT-P366T (compared with P. umsongensis DSM16611T) and IT-P374T (compared with P. koreensis LMG21318T). Unlike P. umsongensis DSM16611T, strains of P. serbica can grow on D-mannitol, but not on pectin, D-galacturonic acid, L-galactonic acid lactone and α-hydroxybutyric acid. In contrary to P. koreensis LMG21318T, strains of P. serboccidentalis can use sucrose, inosine and α-ketoglutaric acid (but not L-histidine) as carbon sources. Altogether, these results indicate the existence of two novel species for which we propose the names Pseudomonas serbica sp. nov., with the type strain IT-P366T (=CFBP 9060 T = LMG 32732 T = EML 1791 T) and Pseudomonas serboccidentalis sp. nov., with the type strain IT-P374T (=CFBP 9061 T = LMG 32734 T = EML 1792 T). Strains from this study presented a set of phytobeneficial functions modulating plant hormonal balance, plant nutrition and plant protection, suggesting a potential as Plant Growth-Promoting Rhizobacteria (PGPR). © 2023 Elsevier GmbH
T2  - Systematic and Applied Microbiology
T2  - Systematic and Applied Microbiology
T1  - Two novel species isolated from wheat rhizospheres in Serbia: Pseudomonas
serbica sp. nov. and Pseudomonas serboccidentalis sp. nov.
IS  - 4
VL  - 46
DO  - 10.1016/j.syapm.2023.126425
ER  - 

@article{
author = "Todorović, Irena and Abrouk, Danis and Kyselková, Martina and Lavire, Céline and Rey, Marjolaine and Raičević, Vera and Jovičić-Petrović, Jelena and Moënne-Loccoz, Yvan and Muller, Daniel",
year = "2023",
abstract = "Pseudomonas strains IT-194P, IT-215P, IT-P366T and IT-P374T were isolated from the rhizospheres of wheat grown in soils sampled from different fields (some of them known to be disease-suppressive) located near Mionica, Serbia. Phylogenetic analysis of the 16S rRNA genes and of whole genome sequences showed that these strains belong to two potentially new species, one containing strains IT-P366T and IT-194P and clustering (whole genome analysis) next to P. umsongensis DSM16611T, and another species containing strains IT-P374T and IT-215P and clustering next to P. koreensis LMG21318T. Genome analysis confirmed the proposition of novel species, as ANI was below the threshold of 95% and dDDH below 70% for strains IT-P366T (compared with P. umsongensis DSM16611T) and IT-P374T (compared with P. koreensis LMG21318T). Unlike P. umsongensis DSM16611T, strains of P. serbica can grow on D-mannitol, but not on pectin, D-galacturonic acid, L-galactonic acid lactone and α-hydroxybutyric acid. In contrary to P. koreensis LMG21318T, strains of P. serboccidentalis can use sucrose, inosine and α-ketoglutaric acid (but not L-histidine) as carbon sources. Altogether, these results indicate the existence of two novel species for which we propose the names Pseudomonas serbica sp. nov., with the type strain IT-P366T (=CFBP 9060 T = LMG 32732 T = EML 1791 T) and Pseudomonas serboccidentalis sp. nov., with the type strain IT-P374T (=CFBP 9061 T = LMG 32734 T = EML 1792 T). Strains from this study presented a set of phytobeneficial functions modulating plant hormonal balance, plant nutrition and plant protection, suggesting a potential as Plant Growth-Promoting Rhizobacteria (PGPR). © 2023 Elsevier GmbH",
journal = "Systematic and Applied Microbiology, Systematic and Applied Microbiology",
title = "Two novel species isolated from wheat rhizospheres in Serbia: Pseudomonas
serbica sp. nov. and Pseudomonas serboccidentalis sp. nov.",
number = "4",
volume = "46",
doi = "10.1016/j.syapm.2023.126425"
}

Todorović, I., Abrouk, D., Kyselková, M., Lavire, C., Rey, M., Raičević, V., Jovičić-Petrović, J., Moënne-Loccoz, Y.,& Muller, D.. (2023). Two novel species isolated from wheat rhizospheres in Serbia: Pseudomonas
serbica sp. nov. and Pseudomonas serboccidentalis sp. nov.. in Systematic and Applied Microbiology, 46(4).
https://doi.org/10.1016/j.syapm.2023.126425

Todorović I, Abrouk D, Kyselková M, Lavire C, Rey M, Raičević V, Jovičić-Petrović J, Moënne-Loccoz Y, Muller D. Two novel species isolated from wheat rhizospheres in Serbia: Pseudomonas
serbica sp. nov. and Pseudomonas serboccidentalis sp. nov.. in Systematic and Applied Microbiology. 2023;46(4).
doi:10.1016/j.syapm.2023.126425 .

Todorović, Irena, Abrouk, Danis, Kyselková, Martina, Lavire, Céline, Rey, Marjolaine, Raičević, Vera, Jovičić-Petrović, Jelena, Moënne-Loccoz, Yvan, Muller, Daniel, "Two novel species isolated from wheat rhizospheres in Serbia: Pseudomonas
serbica sp. nov. and Pseudomonas serboccidentalis sp. nov." in Systematic and Applied Microbiology, 46, no. 4 (2023),
https://doi.org/10.1016/j.syapm.2023.126425 . .

TY  - JOUR
AU  - Todorović, Irena
AU  - Yvan, Moenne-Loccoz
AU  - Vera, Raičević
AU  - Jelena, Jovičić-Petrović
AU  - Daniel, Muller
PY  - 2023
UR  - http://aspace.agrif.bg.ac.rs/handle/123456789/6529
AB  - Fusarium species are cosmopolitan soil phytopathogens from the division Ascomycota, which produce mycotoxins and cause significant economic losses of crop plants. However, soils suppressive to Fusarium diseases are known to occur, and recent knowledge on microbial diversity in these soils has shed new lights on phytoprotection effects. In this review, we synthesize current knowledge on soils suppressive to Fusarium diseases and the role of their rhizosphere microbiota in phytoprotection. This is an important issue, as disease does not develop significantly in suppressive soils even though pathogenic Fusarium and susceptible host plant are present, and weather conditions are suitable for disease. Soils suppressive to Fusarium diseases are documented in different regions of the world. They contain biocontrol microorganisms, which act by inducing plants’ resistance to the pathogen, competing with or inhibiting the pathogen, or parasitizing the pathogen. In particular, some of the Bacillus, Pseudomonas, Paenibacillus and Streptomyces species are involved in plant protection from Fusarium diseases. Besides specific bacterial populations involved in disease suppression, next-generation sequencing and ecological networks have largely contributed to the understanding of microbial communities in soils suppressive or not to Fusarium diseases, revealing different microbial community patterns and differences for a notable number of taxa, according to the Fusarium pathosystem, the host plant and the origin of the soil. Agricultural practices can significantly influence soil suppressiveness to Fusarium diseases by influencing soil microbiota ecology. Research on microbial modes of action and diversity in suppressive soils should help guide the development of effective farming practices for Fusarium disease management in sustainable agriculture.
PB  - Frontiers
T2  - Frontiers in Plant Science
T1  - Microbial diversity in soils suppressive to Fusarium diseases
VL  - 14
DO  - 10.3389/fpls.2023.1228749
ER  - 

@article{
author = "Todorović, Irena and Yvan, Moenne-Loccoz and Vera, Raičević and Jelena, Jovičić-Petrović and Daniel, Muller",
year = "2023",
abstract = "Fusarium species are cosmopolitan soil phytopathogens from the division Ascomycota, which produce mycotoxins and cause significant economic losses of crop plants. However, soils suppressive to Fusarium diseases are known to occur, and recent knowledge on microbial diversity in these soils has shed new lights on phytoprotection effects. In this review, we synthesize current knowledge on soils suppressive to Fusarium diseases and the role of their rhizosphere microbiota in phytoprotection. This is an important issue, as disease does not develop significantly in suppressive soils even though pathogenic Fusarium and susceptible host plant are present, and weather conditions are suitable for disease. Soils suppressive to Fusarium diseases are documented in different regions of the world. They contain biocontrol microorganisms, which act by inducing plants’ resistance to the pathogen, competing with or inhibiting the pathogen, or parasitizing the pathogen. In particular, some of the Bacillus, Pseudomonas, Paenibacillus and Streptomyces species are involved in plant protection from Fusarium diseases. Besides specific bacterial populations involved in disease suppression, next-generation sequencing and ecological networks have largely contributed to the understanding of microbial communities in soils suppressive or not to Fusarium diseases, revealing different microbial community patterns and differences for a notable number of taxa, according to the Fusarium pathosystem, the host plant and the origin of the soil. Agricultural practices can significantly influence soil suppressiveness to Fusarium diseases by influencing soil microbiota ecology. Research on microbial modes of action and diversity in suppressive soils should help guide the development of effective farming practices for Fusarium disease management in sustainable agriculture.",
publisher = "Frontiers",
journal = "Frontiers in Plant Science",
title = "Microbial diversity in soils suppressive to Fusarium diseases",
volume = "14",
doi = "10.3389/fpls.2023.1228749"
}

Todorović, I., Yvan, M., Vera, R., Jelena, J.,& Daniel, M.. (2023). Microbial diversity in soils suppressive to Fusarium diseases. in Frontiers in Plant Science
Frontiers., 14.
https://doi.org/10.3389/fpls.2023.1228749

Todorović I, Yvan M, Vera R, Jelena J, Daniel M. Microbial diversity in soils suppressive to Fusarium diseases. in Frontiers in Plant Science. 2023;14.
doi:10.3389/fpls.2023.1228749 .

Todorović, Irena, Yvan, Moenne-Loccoz, Vera, Raičević, Jelena, Jovičić-Petrović, Daniel, Muller, "Microbial diversity in soils suppressive to Fusarium diseases" in Frontiers in Plant Science, 14 (2023),
https://doi.org/10.3389/fpls.2023.1228749 . .