Signatures of de-domestication in autochthonous pig breeds and of domestication in wild boar populations from MC1R and NR6A1 allele distribution
2019
Аутори
Ribani, A.Utzeri, Valerio J.
Geraci, Claudia
Tinarelli, S.
Djan, M.
Velicković, N.
Doneva, R.
Dall'Olio, S.
Costa, L.Nanni
Schiavo, Giuseppina
Bovo, Samuele
Usai, Graziano
Gallo, Maurizio
Radović, Čedomir
Savić, Radomir
Karolyi, Danijel
Salajpal, K.
Gvozdanović, K.
Djurkin-Kusec, Ivona
Skrlep, Martin
Čandek-Potokar, Marjeta
Ovilo, Cristina
Fontanesi, Luca
Чланак у часопису (Објављена верзија)
Метаподаци
Приказ свих података о документуАпстракт
Autochthonous pig breeds are usually reared in extensive or semi-extensive production systems that might facilitate contact with wild boars and, thus, reciprocal genetic exchanges. In this study, we analysed variants in the melanocortin 1 receptor (MC1R) gene (which cause different coat colour phenotypes) and in the nuclear receptor subfamily 6 group A member 1 (NR6A1) gene (associated with increased vertebral number) in 712 pigs of 12 local pig breeds raised in Italy (Apulo-Calabrese, Casertana, Cinta Senese, Mora Romagnola, Nero Siciliano and Sarda) and south-eastern European countries (Krskopolje from Slovenia, Black Slavonian and Turopolje from Croatia, Mangalitsa and Moravka from Serbia and East Balkan Swine from Bulgaria) and compared the data with the genetic variability at these loci investigated in 229 wild boars from populations spread in the same macro-geographic areas. None of the autochthonous pig breeds or wild boar populations were fixed for one allele at both loci. Dome...stic and wild-type alleles at these two genes were present in both domestic and wild populations. Findings of the distribution of MC1R alleles might be useful for tracing back the complex genetic history of autochthonous breeds. Altogether, these results indirectly demonstrate that bidirectional introgression of wild and domestic alleles is derived and affected by the human and naturally driven evolutionary forces that are shaping the Sus scrofa genome: autochthonous breeds are experiencing a sort of 'de-domestication' process, and wild resources are challenged by a 'domestication' drift. Both need to be further investigated and managed.
Кључне речи:
coat colour / conservation / introgression / genetic resources / SNP / Sus scrofa / vertebraeИзвор:
Animal Genetics, 2019, 50, 2, 166-171Издавач:
- Wiley, Hoboken
Финансирање / пројекти:
- Erasmus Mundus JoinEU-SEE Penta Staff mobility scholarships
- University of Bologna RFO funds
- MiPAAF Innovagen project
- Croatian Science Foundation [3396]
- Slovenian Research AgencySlovenian Research Agency - Slovenia [P4-0133]
- Diversity of local pig breeds and production systems for high quality traditional products and sustainable pork chains (EU-634476)
DOI: 10.1111/age.12771
ISSN: 0268-9146
PubMed: 30741434
WoS: 000462133600008
Scopus: 2-s2.0-85061447083
Институција/група
Poljoprivredni fakultetTY - JOUR AU - Ribani, A. AU - Utzeri, Valerio J. AU - Geraci, Claudia AU - Tinarelli, S. AU - Djan, M. AU - Velicković, N. AU - Doneva, R. AU - Dall'Olio, S. AU - Costa, L.Nanni AU - Schiavo, Giuseppina AU - Bovo, Samuele AU - Usai, Graziano AU - Gallo, Maurizio AU - Radović, Čedomir AU - Savić, Radomir AU - Karolyi, Danijel AU - Salajpal, K. AU - Gvozdanović, K. AU - Djurkin-Kusec, Ivona AU - Skrlep, Martin AU - Čandek-Potokar, Marjeta AU - Ovilo, Cristina AU - Fontanesi, Luca PY - 2019 UR - http://aspace.agrif.bg.ac.rs/handle/123456789/5109 AB - Autochthonous pig breeds are usually reared in extensive or semi-extensive production systems that might facilitate contact with wild boars and, thus, reciprocal genetic exchanges. In this study, we analysed variants in the melanocortin 1 receptor (MC1R) gene (which cause different coat colour phenotypes) and in the nuclear receptor subfamily 6 group A member 1 (NR6A1) gene (associated with increased vertebral number) in 712 pigs of 12 local pig breeds raised in Italy (Apulo-Calabrese, Casertana, Cinta Senese, Mora Romagnola, Nero Siciliano and Sarda) and south-eastern European countries (Krskopolje from Slovenia, Black Slavonian and Turopolje from Croatia, Mangalitsa and Moravka from Serbia and East Balkan Swine from Bulgaria) and compared the data with the genetic variability at these loci investigated in 229 wild boars from populations spread in the same macro-geographic areas. None of the autochthonous pig breeds or wild boar populations were fixed for one allele at both loci. Domestic and wild-type alleles at these two genes were present in both domestic and wild populations. Findings of the distribution of MC1R alleles might be useful for tracing back the complex genetic history of autochthonous breeds. Altogether, these results indirectly demonstrate that bidirectional introgression of wild and domestic alleles is derived and affected by the human and naturally driven evolutionary forces that are shaping the Sus scrofa genome: autochthonous breeds are experiencing a sort of 'de-domestication' process, and wild resources are challenged by a 'domestication' drift. Both need to be further investigated and managed. PB - Wiley, Hoboken T2 - Animal Genetics T1 - Signatures of de-domestication in autochthonous pig breeds and of domestication in wild boar populations from MC1R and NR6A1 allele distribution EP - 171 IS - 2 SP - 166 VL - 50 DO - 10.1111/age.12771 ER -
@article{ author = "Ribani, A. and Utzeri, Valerio J. and Geraci, Claudia and Tinarelli, S. and Djan, M. and Velicković, N. and Doneva, R. and Dall'Olio, S. and Costa, L.Nanni and Schiavo, Giuseppina and Bovo, Samuele and Usai, Graziano and Gallo, Maurizio and Radović, Čedomir and Savić, Radomir and Karolyi, Danijel and Salajpal, K. and Gvozdanović, K. and Djurkin-Kusec, Ivona and Skrlep, Martin and Čandek-Potokar, Marjeta and Ovilo, Cristina and Fontanesi, Luca", year = "2019", abstract = "Autochthonous pig breeds are usually reared in extensive or semi-extensive production systems that might facilitate contact with wild boars and, thus, reciprocal genetic exchanges. In this study, we analysed variants in the melanocortin 1 receptor (MC1R) gene (which cause different coat colour phenotypes) and in the nuclear receptor subfamily 6 group A member 1 (NR6A1) gene (associated with increased vertebral number) in 712 pigs of 12 local pig breeds raised in Italy (Apulo-Calabrese, Casertana, Cinta Senese, Mora Romagnola, Nero Siciliano and Sarda) and south-eastern European countries (Krskopolje from Slovenia, Black Slavonian and Turopolje from Croatia, Mangalitsa and Moravka from Serbia and East Balkan Swine from Bulgaria) and compared the data with the genetic variability at these loci investigated in 229 wild boars from populations spread in the same macro-geographic areas. None of the autochthonous pig breeds or wild boar populations were fixed for one allele at both loci. Domestic and wild-type alleles at these two genes were present in both domestic and wild populations. Findings of the distribution of MC1R alleles might be useful for tracing back the complex genetic history of autochthonous breeds. Altogether, these results indirectly demonstrate that bidirectional introgression of wild and domestic alleles is derived and affected by the human and naturally driven evolutionary forces that are shaping the Sus scrofa genome: autochthonous breeds are experiencing a sort of 'de-domestication' process, and wild resources are challenged by a 'domestication' drift. Both need to be further investigated and managed.", publisher = "Wiley, Hoboken", journal = "Animal Genetics", title = "Signatures of de-domestication in autochthonous pig breeds and of domestication in wild boar populations from MC1R and NR6A1 allele distribution", pages = "171-166", number = "2", volume = "50", doi = "10.1111/age.12771" }
Ribani, A., Utzeri, V. J., Geraci, C., Tinarelli, S., Djan, M., Velicković, N., Doneva, R., Dall'Olio, S., Costa, L.Nanni, Schiavo, G., Bovo, S., Usai, G., Gallo, M., Radović, Č., Savić, R., Karolyi, D., Salajpal, K., Gvozdanović, K., Djurkin-Kusec, I., Skrlep, M., Čandek-Potokar, M., Ovilo, C.,& Fontanesi, L.. (2019). Signatures of de-domestication in autochthonous pig breeds and of domestication in wild boar populations from MC1R and NR6A1 allele distribution. in Animal Genetics Wiley, Hoboken., 50(2), 166-171. https://doi.org/10.1111/age.12771
Ribani A, Utzeri VJ, Geraci C, Tinarelli S, Djan M, Velicković N, Doneva R, Dall'Olio S, Costa L, Schiavo G, Bovo S, Usai G, Gallo M, Radović Č, Savić R, Karolyi D, Salajpal K, Gvozdanović K, Djurkin-Kusec I, Skrlep M, Čandek-Potokar M, Ovilo C, Fontanesi L. Signatures of de-domestication in autochthonous pig breeds and of domestication in wild boar populations from MC1R and NR6A1 allele distribution. in Animal Genetics. 2019;50(2):166-171. doi:10.1111/age.12771 .
Ribani, A., Utzeri, Valerio J., Geraci, Claudia, Tinarelli, S., Djan, M., Velicković, N., Doneva, R., Dall'Olio, S., Costa, L.Nanni, Schiavo, Giuseppina, Bovo, Samuele, Usai, Graziano, Gallo, Maurizio, Radović, Čedomir, Savić, Radomir, Karolyi, Danijel, Salajpal, K., Gvozdanović, K., Djurkin-Kusec, Ivona, Skrlep, Martin, Čandek-Potokar, Marjeta, Ovilo, Cristina, Fontanesi, Luca, "Signatures of de-domestication in autochthonous pig breeds and of domestication in wild boar populations from MC1R and NR6A1 allele distribution" in Animal Genetics, 50, no. 2 (2019):166-171, https://doi.org/10.1111/age.12771 . .